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Cytogenetic Tests List
Karyotyping •
Abortus Material (Long term culture) •
Amniotic Fluid (Cell Culture) •
Ataxia Telengiectasia - Bleomycin assay •
Blood Chromosomes •
Bone Marrow chromosomes •
Chorionic Villi samples (Long term culture) •
Cord Blood Prenatal- Chromosomes •
Falconi’s Anemia (Mitomycin Assay) •
Fibroblast culture for other test •
Fragile X Syndrome - Thymidine block •
Prader Willi syndrome- microdeletion Chm 15 •
Recurrent Abortions, Husband and Wife
F.I.S.H. Cytogenetic studies
•
Amniotic Fluid (5 probes 18, 21, 13, X, Y) •
Amniotic Fluid culture + F.I.S.H (5 probes) •
Chromosome 21/13 only or (X,Y,18) •
Chromosome 21 •
Chromosome 16 •
Chromosome X & Y Microdeletion
Syndrome •
Williams Syndrome •
Retinoblastoma •
Prader Willli's Syndrome •
Miller Decker/Lis gene •
Smith-Magenis •
Di George Syndrome-Tuple 1 probe •
Di George Syndrome-N25 probe Leukemias
•
Bcr/Abl dual probe (CML) •
Translocation 8/ 21 probe (AML) •
Transloc. 15 / 17 probe (Ac. P.L) •
Breast cancer Her 2 gene amplification •
Small cell cancer of Lung - EGFR mutation •
Translocation 8/14 (Burkitts, others) DNA
Tests •
Achondroplasia •
Albinism-OCA 1 Tyrosinase gene sequencing/ Albinism-OCA 2
gene-Common deletion •
Alkaptonuria-linkage studies/ Prenatal Diagnosis-linkage
• Alpha
1 Anti Typsin (Z, S & M Mutation) •
Alpha thalassemia-deletions •
Aneuploidy screening (21, 18, 13, X, Y, chm) •
Angelman Syndrome (methylation test) •
Apert Syndrome •
Apo E Genotyping •
Ataxia Telangiectasia-carrier screening by linkage
• Ataxia
Telangiectasia-PND by linkage
•
Canavan Disease- Asparto asylase (ASPA) gene sequencing
•
Charcot Marie Tooth disease 1/ HNPP (Del/Dupl. PMP gene)
•
CMV-Cytomegalovirus-PCR
•
Congenital Adrenal Hyperplasia-Common deletion
•
Congenital Adrenal Hyperplasia- 5 mutations
•
Congenital Adrenal Hyperplasia-deletions by dosage test
•
Congenital Adrenal Hyperplasia-Prenatal diagnosis-linkage
•
Congenital Adrenal Hyperplasia-Cyp 21 gene sequencing
•
Craniosynostosis ( non specific) C749-FGFR 3
•
Crigler Najjar Syn.- UGT1A1 gene sequencing
•
Cruozon disease: FGFR 2 mutation (Ser 354 Cys)
•
Cystic Fibrosis- Diagnosis (Delta 508 mutation)
•
Cystic Fibrosis- 254 Mutations + Poly T
•
Cystic Megalencephaly- MLC1 gene sequencing
•
Cystic Megalencephaly- Prenatal Diagnosis CVS
•
Deafness Connexin 26 gene-sequencing
•
DMD deletion testing - 18 exons
•
DMD 79 exons- deletion/duplication test
•
DMD-Dosage studies in females
•
DMD - Prenatal diagnosis + maternal cell contamination
•
Dystonia (DYT 1 gene- common deletion)
•
Ectodermal dysplasia X- linked –PND by linkage +MCC
•
Ectodermal dysplasia X- linked, gene sequencing
•
Epidermolysis bullosa dystrophia (PND- by linkage)
•
Factor V Leiden
•
Familial hypercholesterolemia (linkage, Prenatal)
•
FGFR 3 gene sequencing (Ach, Hypochond, Thanatophoric dw)
•
Folate Polymorphism 3' 5 MTHFR ( 677C>T, 1298 A>C)
•
Fragile X Screen- PCR based
•
Fragile XA- methylation test
•
Friedreich Ataxia
•
G-6-PD one mutation
•
Galatosemia gene sequencing (GALT)
•
Gaucher's disease (4 common mutations)
•
Gilbert's disease (UGT1A1 Promoter polymorphism)
•
Glycogen storage 1a gene sequencing
•
Hallorverden-Spantz disease (PND by linkage)
•
Hypochondroplasia (Sequencing)
•
Hemochromatosis (2 mutations in HFE gene)
•
Hemophilia A/B, Carrier test
•
Hemophilia A/B, (Prenatal diagnosis)
•
Herpes Virus infection (PCR)
•
Hunter Syndrome - deletions
•
Huntington disease
•
Hypochondroplasia-common mutation C1620A in FGFR3
•
Jak 2 mutation
•
Krabbes disease- common deletion
•
Leb Hered Optic Atrophy- 3 mutations
•
Lowe Syndrome - linkage studies/ family
•
Lowe Syndrome - Prenatal diagnosis-linkage
•
Maternal Cell Contamination
•
Marfan Syndrome-linkage studies
•
Marfan Syndrome - Prenatal diagnosis-linkage studies/ family
•
MCAD mutation (Medium chain acyl-coA dehyd)
•
McArdle disease (R49 X mutation, Sequencing)
•
Merosin deficiency-linkage/ PND
•
Metaphyseal Dysplasia-COL 10A gene sequencing
•
Mitochondrial/ LEIGHS or NARP-3 mutations
•
Mitochondrial 1/ MELAS + MERRF-5 mutations
•
Mitochondrial package (110, 111)
•
Mitochondrial genome- deletion/duplication
•
Mytotonic dystrophy- type 1-19q 13.3
•
Mytotonic dystrophy- type 2- 3q 21
•
NCL -infantile (2 mutation)
•
NCL -infantile (2 mutation)
•
NCL –Juvenile (Batten Dis) deletion
•
Neuroblastomatosis (linkage, PND)
•
Parkinson disease (Gly 19 ser mutation, by sequencing)
•
Parvo virus-PCR
•
Pelizaeus Merzbacher deletion/duplication
•
Polycystic Kidney dis (Aut. Rec. ARPKD) PND by linkage
•
Porphyria- Acute intermittent Common Mutation
•
Porphyria- Sequencing of Porphobilinogen gene
•
Prader Willi Syndrome-methylation test
•
Prothrombin gene polymorphism (G20210A)
•
Restrictive Dermopathy (Specific mutation by sequencing)
•
Retinoblastoma- deletion/duplication
•
Retinoblastoma (Prenatal diagnosis by linkage)
•
Retinoblastoma gene sequencing
•
Rett Syndrome MECP2 deletion/ duplication
•
Rett Syndrome MECP2 -Sequencing
•
Rh typing - (Rh+ or Rh-)
•
Rh typing on fetal DNA in maternal blood
•
Rubella (PCR)
•
Russel Silver Syndrome (UP Disomy)
•
Spinal Muscular atrophy, diagnosis
•
Spinal Muscular atrophy-PND
•
SMA Carrier Screening for deletion
•
Spinal Muscular atrophy- SMN 1 gene sequencing
•
Spino- Cerebellar ataxia -One type
•
Spino- Cerebellar ataxia -Two type
•
Spino- Cerebellar ataxia -package (1,2,3,6,7,8,12, 17 DRPLA)
•
Spinal bulbar muscular atrophy (SBMA) CAG repeats
•
Spondyloepiphyseal dysplasia X-linked gene sequencing
•
Sry+Amxy gene study (Y chromosome)
•
Subtelomeic deletions & duplications
•
Thalassemia-beta (Confirmation of known mutation)
•
Thalassemia-beta mutation study ( 5 common mutation)
•
Thalassemia-beta globin gene sequencing
•
Thalassemia-Prenatal diagnosis
•
Thalassemia-Prenatal diagnosis-Repeat at GRH
•
Thanotrophic dwarfism (common mutation)
•
Thanotrophic dwarfism sequencing
•
Thrombophilia Profile- 3 genes- MTHFR, Factor v Leiden,Prothrombin
•
Toxoplasmosis (PCR)
•
Waardenburg Syndrome Pax 3 gene sequencing
•
Waardenburg Shah syn- EDN3 gene-3 80A>G
•
Wilson linkage presymptomatic
•
Wilson diseases-PND by linkage
•
Wilson diseases-ATP7B gene sequencing
•
UGT1A1 * 28 Genotyping
•
X-linked ichthyosis (Deletion in STS gene)
•
XMN Polymorphism Gr gene (thalassemia child)
•
Y-Chromosome deletions (10)
HLA (DNA)
• AB
• AB+DR - Additional
person (beyond 2 persons)
• AB+DR - One
person
• AB+DR - Two
persons
• AB+DR+DQ
• B27
• DQ Alpha -
Recurrent abortions
• DQ Beta -
Recurrent abortions
• DQ Alpha &
beta - Recurrent abortions
• DR2-Narcolepsy,
M.S. Goodpasture syndrome
• DQ2/DQ8 Celiac
disease High risk genotype
• DR3- , Addison
disease, Derm Nerpc HLA-B5, Behcet's disease
• HLA- Y STR Polymorphism (for two)
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Eastern Biotech & Life Sciences FZ-LLC
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